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Batch System PBSPro (Hawk)

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Revision as of 16:33, 18 August 2019 by Hpcchris (talk | contribs) (Improve example section)
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The batch system on Hawk TDS is PBSPro 19.2.1. For general usage see the PBS User Guide (19.2.3)

At the moment the setup is basic and it works for the TDS only. More features, testing and productive like setup will be done in July.


Single node

Here is an example for a job using a single node:

qsub -l nodes=2,walltime=1:00:00

The basic commands to build and run a MPI program are:

module load mpt

mpicc hi.hpe.c -o hi.hpe

mpirun ./hi.hpe

simple batch script

Here is a simple pbs job script:

File: Job.hi.hpe.pbs

#PBS -N Hi_Thomas
#PBS -l select=16:mpiprocs=64
#PBS -l walltime=00:20:00
module load mpt
mpirun ./hi.hpe

To submit the job script execute

qsub Job.hi.hpe.pbs