- Infos im HLRS Wiki sind nicht rechtsverbindlich und ohne Gewähr -
- Information contained in the HLRS Wiki is not legally binding and HLRS is not responsible for any damages that might result from its use -

HPE Hawk: Difference between revisions

From HLRS Platforms
Jump to navigationJump to search
No edit summary
 
(184 intermediate revisions by 9 users not shown)
Line 1: Line 1:
'''Hawk''' is the next generation HPC system at HLRS. It will replace the existing [[Cray XC40|HazelHen]] system.
The installation is planed to take place in Q4 2019. For more detailed information see the [[Hawk installation schedule]].


This Page is under construction!
{{Note
| text = Please be sure to read at least the [[10_minutes_before_the_first_job]] document and consult the [[General HWW Documentation]] before you start to work with any of our systems.
}}


[[Batch_System_PBSPro_(Hawk)|Batch System PBSPro (Hawk)]]
{{Warning
| text = In prepartion of the next generation supercomputer [[ Hunter_(HPE) | Hunter ]], the hardware configuration has been reduced (from 5632 compute nodes to 4096 compute nodes). Workspace filesystem ws10 has been removed.
}}


== MPI ==


In order to use the MPI implementation provided by HPE, please load the Message Passing Toolkit (MPT) module ''mpt'' (not ABI-compatible to other MPI implementations) or ''hmpt'' (ABI-compatible to MPICH-derivatives).
----
For detailed information see the [http://www.hpe.com/support/mpi-ug-036 HPE Message Passing Interface (MPI) User Guide].


<br>


== TODO ==
{| style="border:0; margin: 0;" width="100%" cellspacing="10"


* 2019-08-15, niethammer@hlrs.de:
| valign="top" style="padding: 0; border: 1px solid #aaaaaa; margin-bottom: 0;" |
** MPT = Message Passing Toolkit
<div style="font-size: 105%; padding: 0.4em; background-color: #eeeeee; border-bottom: 1px solid #aaaaaa; text-align: center;">'''Introduction'''</div>
** MPI from the mpt module uses the SGI ABI
<div style="background: #ffffff; padding:0.2em 0.4em;">
** for the MPI compiler wrappers to detect the correct compiler please set MPICC_CC, MPICXX_CXX, MPIF90_F90, MPIF08_F08 to the corresponding compiler commands
{| style="border: 0; margin: 0;" cellpadding="3"
** Should e.g. applications using cae/platform_mpi use perfboost?
| valign="top" | 
<!-- * [[Hawk_installation_schedule#Terms_of_Use | Terms of use ]] -->
* [[HPE_Hawk_access|Access]]
* [[HPE_Hawk_Hardware_and_Architecture|Hardware and Architecture]]
|}
</div>


* 2019-08-07, dick@hlrs: hmpt always uses GCC (the 1st in PATH) -> adapt s.t. other compilers can also be used. Or do we have to use -lmpi instead?


* 2019-08-07, dick@hlrs: hmpt is ABI-compatible with MPICH-derivativs, but not so mpt
** user should know about this!
** @HPE: is hmpt a MPICH-derivative, but not so mpt?


* 2019-08-07, dick@hlrs: unclear that (h)mpt provides MPI lib -> call it "mpi/hmpt" and "mpi/mpt" instead?
| valign="top" style="padding: 0; border: 1px solid #aaaaaa; margin-bottom: 0;" |
<div style="font-size: 105%; padding: 0.4em; background-color: #eeeeee; border-bottom: 1px solid #aaaaaa; text-align: center;">'''Troubleshooting'''</div>
<div style="background: #ffffff; padding:0.2em 0.4em;">
{| style="border: 0; margin: 0;" cellpadding="3"
| valign="top" | 
* [[HPE_Hawk_Support|Support (contact/staff)]]
* [[HPE_Hawk_FAQ|FAQ]]
* [http://websrv.hlrs.de/cgi-bin/hwwweather?task=viewmachine&machine=hawk Status,Maintenance for hawk]
* [[HPE_Hawk_News|News]]
|}
</div>


* 2019-08-07, dick@hlrs: remove MPI delivered with RHEL


* 2019-08-07, dick@hlrs: Intel loads gcc module -> use (LD_)LIBRARY_PATH intead
|}


* 2019-08-07, dick@hlrs: be careful: cc points to /usr/bin/gcc!


* 2019-08-14, khabi/offenhaeuser@hlrs.de: How to pin OpenMP-threads in hybrid jobs (naive approach pins 2 threads to _same_ core instead of two different), i.e.: how to do aprun -d?


* 2019-07-14, khabi/offenhaeuser@hlrs.de:


<br>


== Modulefile best practices ==
{| style="border:0; margin: 0;" width="100%" cellspacing="10"


* Set an environment variable to the root path of your installation (cf. e.g. MPI_ROOT in /usr/share/Modules/modulefiles/hmpt/2.19).
| valign="top" style="padding: 0; border: 1px solid #aaaaaa; margin-bottom: 0;" |
* Set not only CPATH but also respective variables used by PGI / Intel / etc. -> someone has to figure out the list of those variables, same w.r.t. (LD_)LiBRARY_PATH.
<div style="font-size: 105%; padding: 0.4em; background-color: #eeeeee; border-bottom: 1px solid #aaaaaa; text-align: center;">'''Documentation'''</div>
* Include your Name (finger does not work anymore), E-Mail and date of installation into the modulefile.
<div style="background: #ffffff; padding:0.2em 0.4em;">
* It's possible to hold the modulefile(s) together with the actual installation in the respective directory and just create symlinks in /opt/hlrs/modulefiles/.
{| style="border: 0; margin: 0;" cellpadding="3"
* Directory structure of /opt/hlrs/ shall be replicated in /opt/hlrs/unsupported-modulefiles/.
| valign="top" | 
* In case of dependencies, load explicit versions instead of default one!
* [[Batch_System_PBSPro_(Hawk)|Batch System]]
* [[Module environment(Hawk)|Module Environment]]
* [[Storage_(Hawk)| Storage Description ]]
* [[Compiler(Hawk)|Compiler]]
* [[MPI(Hawk)|MPI]]
* [[Libraries(Hawk)|Libraries]]
* [[Manuals(Hawk)|Manuals]]
* [[Optimization|Optimization]]
* [[Hawk_PrePostProcessing|Pre- and Post-Processing]]
* [[Big_Data,_AI_Aplications_and_Frameworks|Big Data, AI Applications and Frameworks]]
* [[Performance Analysis Tools]]
* [[CPE|Cray Programming Environment (CPE)]]


As an example a modulefile for package "foo" version 1.23 (within the category "performance") should look like:
|}
</div>
#%Module1.0
BASE_DIR=/opt/hlrs/
CAT=performance
PACKAGE=Foo
VERSION=1.23
PACKAGE_ROOT=$BASE_DIR/$CAT/$PACKAGE/$VERSION
setenv PACKAGE_ROOT $PACKAGE_ROOT
setenv PACKAGE_VERSION $VERSION
prepend-path PATH                $PACKAGE_ROOT/bin
prepend-path LD_LIBRARY_PATH    $PACKAGE_ROOT/lib        # library search path at time of execution
prepend-path LIBRARY_PATH        $PACKAGE_ROOT/lib        # equivalent of "-L" for C, C++, and Fortran; works for gcc and clang
prepend-path CPATH              $PACKAGE_ROOT/include    # equivalent to "-I" for C and C++; works with gcc and clang
prepend-path CPLUS_INCLUDE_PATH  $PACKAGE_ROOT/include    # equivalent to "-I" only for C++ compiler; usually not needed as CPATH will do
#prepend-path C_INCLUDE_PATH      $PACKAGE_ROOT/include    # equivalent to "-I" only for C compiler; usually not needed as CPATH will do
###  not verified yet, seems to be intel specific: prepend-path FPATH              $PACKAGE_ROOT/include    # same for Fortran


== Test cases best practices ==


Test cases will help to identify and determine the scaling/ performance behavior of the new system.
Ideally, those test cases can be compared to other systems as well to get a full picture.


To do:
| valign="top" style="padding: 0; border: 1px solid #aaaaaa; margin-bottom: 0;" |
* Definition of a best practice guideline on how to set up a correct test case
<div style="font-size: 105%; padding: 0.4em; background-color: #eeeeee; border-bottom: 1px solid #aaaaaa; text-align: center;">'''Utilities'''</div>
** Only measurement of time-stepping loop or equivalent excluding the initialization phase or cleanup
<div style="background: #ffffff; padding:0.2em 0.4em;">
** Well defined measure of computational progress (e.g. LUPS, DoF-UPS, Iterations/s or Flop/s)
{| style="border: 0; margin: 0;" cellpadding="3"
** Ideally, the test case is mostly automated with scripts and does also the evaluation on top with a meaningful result file
| valign="top" | 
* [[CAE_utilities|CAE Utilities]]
* [[CAE_howtos|CAE HOWTOs]]
* [[MKL | MKL Fortran Interfaces ]]
|}
</div>
 
|}
 
 
----
[[Help | Help for Wiki Usage]]

Latest revision as of 08:44, 25 October 2024

Note: Please be sure to read at least the 10_minutes_before_the_first_job document and consult the General HWW Documentation before you start to work with any of our systems.


Warning: In prepartion of the next generation supercomputer Hunter , the hardware configuration has been reduced (from 5632 compute nodes to 4096 compute nodes). Workspace filesystem ws10 has been removed.



Introduction
Troubleshooting




Documentation
Utilities


Help for Wiki Usage

Retrieved from "https://kb.hlrs.de/platforms/index.php?title=HPE_Hawk&oldid=7551"